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#jupyter

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🎉 JupyterLite 0.6 is now available!

Coming with exciting new features:

✨ Interactive input() support (useful for teaching Python)
🔄 New REPL options
🎯 Better kernel status and logs
🧹 Easier browser data management
⚡️ Improved multi-tab support and storage isolation

Check out the blog post and walkthrough video:

➡️ blog.jupyter.org/jupyterlite-0
➡️ youtube.com/watch?v=jkQ9ORG5qA

Thanks @QuantStack, Bloomberg, CourseKata and all the contributors!

Jupyter Blog · JupyterLite 0.6.0 is released! 🎉 - Jupyter BlogBy Jeremy Tuloup

Utilisateur longue date de #jupyter (pour mes cours, mes conf, ma recherche, etc...) je viens de découvrir #marimo et je dois dire que je suis bluffé.

- plein de protection pour ne pas pouvoir faire des notebook "perdus" qu'on ne peut plus faire tourner
- "pur python" juste un package python
- pousse à faire des fonctions (c'est bon ça !)
- notebook compatible avec le suivit de version
- basculer rapidement de l'édition à l'utilisation, faire des app standalone, ...
- la souplesse de l'environnement
- bonne doc / bon tutorial
- plein de widget bien pensés
- intégration de mes outils préférés
- fun (mais ça, ça s'estompe vite...)

bref je pense m'en servir de plus en plus...

( pub gratuite ! )

@marimo_io

At the #AustralianPlantPhenomicsNetwork (#APPN), we're just concluding a project (Multiscalar Crop Characterisation Network) we've run with support from the #AustralianResearchDataCommons (#ARDC) to develop or adopt #Python tools and pipelines for simpler construction of geospatial data cubes from disparate sources (GeoTIFF, shapefiles, CSV data with point measurements, etc.). "Simpler" may only be relative, and others understand how to do this better, but I'm pleased with the results.

We're using STAC catalogues to drive an ODC-based engine for constructing xarray datacubes. The main tweaks have been in handling non-raster formats more smoothly.

As APPN goes forward, we expect to generate STAC metadata for pretty much any data objects that derive from observations with coordinates (UAV images, orthomosaics, point clouds, plot observations and measurements, etc.) and want to make it as easy as possible to plug and play with arbitrary sets of these and with relevant environment and climate data from other sources.

Three repositories:

stac-generator - configuration-driven generation of STAC catalogue records - github.com/aus-plant-phenomics

mccn-engine - loading and saving data cubes - github.com/aus-plant-phenomics

mccn-case-studies - six #Jupyter notebooks that do semi-meaningful things with different data samples - github.com/aus-plant-phenomics

All case studies also generate #RO-Crate packages, because we are heavily into adopting it (and #JSON-LD, schema.org, etc.) everywhere to contextualise our data to make it as #FAIR as possible.

#Pikchr (pikchr.org) is a great little piece of software from the SQLite folks. It parses a little language for describing diagrams with boxes and lines and things, and puts out SVG.

#OrgMode (orgmode.org) has, among many other things, a way you can make code notebooks, #OrgBabel. Like #Jupyter, but less webby, and inside #Emacs, and supporting many languages - even multiple in the same document - thence its name.

Thanks to the ob-pikchr package by @SReyCoyrehourcq, Pikchr is one of the languages you can just write in the middle of your document this way.

Pikchr supports #darkmode, and I've just made a pull request that gets ob-pikchr in on the dark-mode game.

github.com/reyman/ob-pikchr/pu

Many thanks to Sebastien for the help ob-pikchr has provided in diagramming my thoughts! You go use it too!

GitHubadd dark mode support by jaredjennings · Pull Request #1 · reyman/ob-pikchrBy jaredjennings

I am really looking forward to a time when scientific data analysis is less of a constant fuckaround and fight with technical bullshit. I'd *really* like

- #netCDF natively supporting complex numbers
- #Python #xarray and #pandas to natively support physical units (#pint is great on its own but the integrations leave a LOT to be desired)
- #Jupyter notebooks to suck less (crashes, glitches, widget plots not saved statically, an effing BUILTIN formatter, etc.)
- proper data pipeline systems
...

Continued thread

📋 if you do not have a place to install and run a #jupyter, other options are available for free online.

I have already written about them to death in my books on quantitative research methods and advanced data analysis. Each of these books is available here: datatofu.wordpress.com/#DIY

I also mention them in my other books, so, honestly speaking, you are welcome to browse around.

Shaolin Data ScienceShaolin Data ScienceServing you digestible big data analysis and analytics systems.

#python is an interpreted language. The Python interpreter runs a program by executing one statement at a time. The standard interactive Python interpreter can be invoked on the command line with the python command

data analysis or scientific computing make use of IPython, an enhanced Python interpreter, or #jupyter notebooks, web-based code notebooks originally created within the IPython project.