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Simon WorthingtonWorkshop <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> : AI-Assisted Literature Review at WII, Dehradun, North India - @ Wildlife Institute of India (WII) <a href="https://semanticclimate.github.io/p/en/events/ALR_bio/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://semanticclimate.github.io/p/en/events/ALR_bio/</a> Session 1 : Fundamentals of AI and Natural Language Processing (NLP) Session 2 : Workspace Demo: AI over NLP using our Semantic Toolkit Session 3 : DIY! AI over Your Own Literature Metadata <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a>

Simon Worthington🧵 5/8 - <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> - <a href="https://semanticclimate.github.io/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://semanticclimate.github.io/</a> events, software, tutorials. | Journal Article: Worthington, Simon, Gitanjali Yadav, Shweata Hegde, Renu Kumari, Neeraj Kumari, and Peter Murray-Rust. 2024. ‘The <a href="https://openbiblio.social/tags/SemanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#SemanticClimate</a> Community: Making Open-Source Software for Knowledge Liberation’. Annals of Library and Information Studies <a href="https://doi.org/10.56042/alis.v71i4.14285" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.56042/alis.v71i4.14285</a> | Pic: AI for Climate | A Data Mining Workshop. Center for Applied Geomatics, CRDF, Ahmedabad, Gujarat, India - <a href="https://semanticclimate.github.io/p/en/past-events/datathon_CRDF/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://semanticclimate.github.io/p/en/past-events/datathon_CRDF/</a>

Simon Worthington🧵 4/8 - <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> is active on a daily basis as a community and NIPGR supports an India wide internship programme, hackathon series, and youth outreach programme. Additionally <a href="https://openbiblio.social/tags/sC" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#sC</a> presents globally from Beijing, Montevideo, to Berlin. E.g., Hands-on workshop on BioAI for Research, 21-23 January 2025 at <a href="https://openbiblio.social/tags/NIPGR" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#NIPGR</a> <a href="https://semanticclimate.github.io/p/en/posts/bioai_research/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://semanticclimate.github.io/p/en/posts/bioai_research/</a> with a number of interns and volunteers contributing to the programme | Full events list <a href="https://semanticclimate.github.io/p/en/events/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://semanticclimate.github.io/p/en/events/</a>

Simon Worthington🧵 3/8 - ClimateKG comes directly out of the five year old <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> open research group founded by Dr. Gitanjali Yadav of the National Institute of Plant Genome Research <a href="https://openbiblio.social/tags/NIPGR" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#NIPGR</a> Delhi, Dr Peter Murray-Rust of Cambridge University, and Simon Worthington (TIB) which works on software tool development for semantic enrichment. <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a>. Photo: National Conclave on AI and Ethics - <a href="https://semanticclimate.github.io/p/en/past-events/AI_Ethics/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://semanticclimate.github.io/p/en/past-events/AI_Ethics/</a>

Simon Worthingtonjob offer at <a href="https://openbiblio.social/@tibhannover" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@tibhannover</a> working on building a knowedge graph for UN IPCC Reports - Software Developer (m/f/d) <a href="https://www.tib.eu/en/tib/careers-and-apprenticeships/vacancies/details/stellenausschreibung-nr-20-2025" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.tib.eu/en/tib/careers-and-apprenticeships/vacancies/details/stellenausschreibung-nr-20-2025</a> deadline April 20 <a href="https://openbiblio.social/tags/FediHire" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#FediHire</a> <a href="https://openbiblio.social/tags/fedijobs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#fedijobs</a> <a href="https://openbiblio.social/tags/getfedihired" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#getfedihired</a> - Some context and background on the project <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a> <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> <a href="https://openbiblio.social/tags/knowledgegraph" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#knowledgegraph</a> 🧵 1/8

Simon Worthington🧵 9/9 How did we get here. <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a> comes out of the five year old <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> (<a href="https://openbiblio.social/tags/sC" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#sC</a>) open research group founded by Dr. Gitanjali Yadav of the National Institute of Plant Genome Research (NIPGR), Delhi, Dr Peter Murray-Rust of Cambridge University, and Simon Worthington. We works on software tool development for semantic enrichment. <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> is active on a daily basis as a community and NIPGR supports an internship programme, hackathons, & outreach. Web: <a href="https://semanticclimate.github.io/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://semanticclimate.github.io/</a>

Simon Worthington🧵 7/9 <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a> foundational software: Dictionaries, machine learning, etc. This all comes from team <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a>. Status: Production. Here is a live demo that explains the tool chain of <a href="https://colab.research.google.com/github/semanticClimate/sC-tools-demo/blob/main/TTWW_demo_sC_tools.ipynb" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://colab.research.google.com/github/semanticClimate/sC-tools-demo/blob/main/TTWW_demo_sC_tools.ipynb</a> for machine learning and <a href="https://openbiblio.social/tags/TBL" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#TBL</a> 5*-ification of data - shout out to the developers DEVELOPERS: 1. pygetpapers - Ayush Garg 2. amilib - Peter Murray-Rust 2. docanalysis - Shweata N Hegde 2. Jupyter notebooks - Parijat Bhadra, Renu Kumari

Simon Worthington🧵 5/9 Data relationship model: Status Pre-alpha - This will be the core of 2025 work. The content has been preped, the <a href="https://openbiblio.social/tags/Wikibase" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Wikibase</a> infra is ready. Plans are to <a href="https://openbiblio.social/tags/KISS" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#KISS</a> and build up a simple framework for the <a href="https://openbiblio.social/tags/climate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#climate</a> community to connect to. Experiments have been made on <a href="https://openbiblio.social/tags/Wikibasecloud" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Wikibasecloud</a> <a href="https://kg-ipclimatec-reports.wikibase.cloud/wiki/Main_Page" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://kg-ipclimatec-reports.wikibase.cloud/wiki/Main_Page</a> - thanks to Egon Willighagen, Lars Willighagen 🚀 <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a> <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a>

Simon Worthington🧵 4/9 IPCC Glossary semantification and enhancement. The 800+ terms from AR5 and AR6 have had several experimental rounds carried out: Screenscraped to GitHub, loaded into a Wikibase install, demonstrated as a index to tag documents, rendered out to Paged Media CSS with Wikipedia enhancements, and translation to Hindi. <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a> <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> - In <a href="https://openbiblio.social/tags/wikibase" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#wikibase</a> <a href="https://climatekg.semanticclimate.net/index.php?title=IPCC_Begriffe" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://climatekg.semanticclimate.net/index.php?title=IPCC_Begriffe</a> as Paged Media CSS using <a href="https://openbiblio.social/tags/vivliostyle" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#vivliostyle</a> <a href="https://vivliostyle.vercel.app/#src=https://raw.githubusercontent.com/semanticClimate/glossary-demo/main/ipccglossary.jsonld" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://vivliostyle.vercel.app/#src=https://raw.githubusercontent.com/semanticClimate/glossary-demo/main/ipccglossary.jsonld</a>

Simon Worthington🧵 3/9 Next is a Report top level data structure: Table of Contents (Visualisation) of AR6 70 chapters. Status <a href="https://openbiblio.social/tags/Alpha" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Alpha</a> - the chapters of Sixth Assessment Report — IPCC. Using <a href="https://openbiblio.social/tags/graphvis" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#graphvis</a> in Python the chapters and their connections are automatically mapped <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a> <a href="https://github.com/semanticClimate/internship_sC/tree/MEBIN/TOC" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/semanticClimate/internship_sC/tree/MEBIN/TOC</a> The TOC structure is designed to provide a clear and hierarchical representation of report sections, including chapters, glossaries, supplemental materials, and cross-chapter references.

Simon Worthington🧵 2/9 First, the foundation: Converting PDFs to semantified HTML with IDs on GitHub. For <a href="https://openbiblio.social/tags/openaccess" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openaccess</a> content this has had several passes already by team <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> - Status <a href="https://openbiblio.social/tags/alpha" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#alpha</a> - <a href="https://github.com/petermr/amilib/tree/pmr_aug/test/resources/ipcc/cleaned_content" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/petermr/amilib/tree/pmr_aug/test/resources/ipcc/cleaned_content</a> the turning burgers back into cows process is in an advanced state!

Simon WorthingtonSoftware Developer (m/f/d) job offer at <a href="https://openbiblio.social/@tibhannover" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@tibhannover</a> working on building a knowedge graph for UN IPCC Reports <a href="https://www.tib.eu/en/tib/careers-and-apprenticeships/vacancies/details/stellenausschreibung-nr-20-2025" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.tib.eu/en/tib/careers-and-apprenticeships/vacancies/details/stellenausschreibung-nr-20-2025</a> deadline April 20 <a href="https://openbiblio.social/tags/FediHire" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#FediHire</a> <a href="https://openbiblio.social/tags/fedijobs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#fedijobs</a> <a href="https://openbiblio.social/tags/getfedihired" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#getfedihired</a> <a href="https://openbiblio.social/tags/ClimateKG" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ClimateKG</a> <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> - Here's a breakdown of what we'll be doing over next year - 🧵 1/9

Simon Worthington🧵 2/6 Climate Knowledge Graph is an R&D project hosted at TIB <a href="https://openbiblio.social/@tibhannover" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@tibhannover</a> – Leibniz Information Centre for Science and Technology and organised partnership with <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a>. It's a 12 month development phase to start in May 2025. The Mission - should you choose to accept it :-) is to support the dissemination of the IPCC Reports. <a href="https://openbiblio.social/tags/frictionlessdata" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#frictionlessdata</a> <a href="https://openbiblio.social/tags/frictionlesspublishing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#frictionlesspublishing</a> to borrow from <a href="https://chaos.social/@okfde" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@okfde</a> | Image: OKFBrasil <a href="https://ok.org.br/noticia/participe-do-hackathon-de-frictionless-data-da-open-knowledge-foundation/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://ok.org.br/noticia/participe-do-hackathon-de-frictionless-data-da-open-knowledge-foundation/</a> …

Simon Worthington<a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> presentations form last week <a href="https://openbiblio.social/tags/OKFN" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#OKFN</a> <a href="https://openbiblio.social/tags/ttww" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ttww</a> conference 'The Tech We Want Online Summit' <a href="https://okfn.org/en/events/the-tech-we-want-online-summit/#" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://okfn.org/en/events/the-tech-we-want-online-summit/#</a> # Shweata Hegde and Parijat Bhadra - see the videos <a href="https://www.youtube.com/live/o50Jd1w6xKw?si=MMeVb_a21fhhFsvu&t=16828" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.youtube.com/live/o50Jd1w6xKw?si=MMeVb_a21fhhFsvu&t=16828</a> and and <a href="https://www.youtube.com/live/V7Sxo0IXe8g?si=63WsQvYrF4Bl_jXq&t=7585" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.youtube.com/live/V7Sxo0IXe8g?si=63WsQvYrF4Bl_jXq&t=7585</a> report <a href="https://semanticclimate.github.io/p/en/posts/ttww2024/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://semanticclimate.github.io/p/en/posts/ttww2024/</a>

Simon Worthington<a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> - in Feb we had 35 Workshop members join a sprint to document the use of <a href="https://openbiblio.social/tags/colab" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#colab</a> <a href="https://openbiblio.social/tags/jupyternotebooks" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#jupyternotebooks</a> for automated literature reviews - great work <a href="https://openbiblio.social/tags/NIPGR" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#NIPGR</a> - in April we'll release the Notebooks used and carry out some more sprints to bed down the workflow

Simon WorthingtonIn Feb at NIPGR <a href="https://openbiblio.social/tags/Delhi" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Delhi</a> the <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> team held a workshop with the 10 lab leaders and 35+ PhD students on running automated literature reviews usiing <a href="https://openbiblio.social/tags/TDM" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#TDM</a> - from the meeting 2 interns will now join a dedicated project for the next 12 weeks to document the workflow with Colab Notebooks - Work starts 2nd April. Updates to follow

Simon Worthingtonfull spectrum, all singing present from lab members of Dr Gitanjali Yadav's students, as a goodbye present. Ganesh inside a cello with floating glitter, + a unicorn pencil ' they must have spotted my pencil collection <a href="https://openbiblio.social/tags/semanticClimate" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#semanticClimate</a> - oh and ganesh has flashing lights - voice over is <a href="https://openbiblio.social/tags/PMR" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#PMR</a> holding court <a href="https://openbiblio.social/tags/Delhi" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Delhi</a> - back to DNA sequences and protein folding for the Lab :-)

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