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Charles PlessyFour years after publishing my work on machine-driven parameter screen of biochemical reactions, it still has zero citations. That makes me sad; I am really proud of this work. So I asked ChatGPT to suggest me hashtags, for another chance to reach readers. <a href="https://academic.oup.com/nar/article/48/7/e37/5728495" rel="nofollow noopener" translate="no" target="_blank">https://academic.oup.com/nar/article/48/7/e37/5728495</a> <a href="https://fediscience.org/tags/MolecularBiology" class="mention hashtag" rel="nofollow noopener" target="_blank">#MolecularBiology</a> <a href="https://fediscience.org/tags/BiochemicalReactions" class="mention hashtag" rel="nofollow noopener" target="_blank">#BiochemicalReactions</a> <a href="https://fediscience.org/tags/ReverseTranscription" class="mention hashtag" rel="nofollow noopener" target="_blank">#ReverseTranscription</a> <a href="https://fediscience.org/tags/RNASequencing" class="mention hashtag" rel="nofollow noopener" target="_blank">#RNASequencing</a> <a href="https://fediscience.org/tags/LabAutomation" class="mention hashtag" rel="nofollow noopener" target="_blank">#LabAutomation</a> <a href="https://fediscience.org/tags/GeneExpression" class="mention hashtag" rel="nofollow noopener" target="_blank">#GeneExpression</a> <a href="https://fediscience.org/tags/SingleCellAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#SingleCellAnalysis</a> <a href="https://fediscience.org/tags/HighThroughput" class="mention hashtag" rel="nofollow noopener" target="_blank">#HighThroughput</a> <a href="https://fediscience.org/tags/AIinScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#AIinScience</a> <a href="https://fediscience.org/tags/ComputationalBiology" class="mention hashtag" rel="nofollow noopener" target="_blank">#ComputationalBiology</a> <a href="https://fediscience.org/tags/BiotechInnovation" class="mention hashtag" rel="nofollow noopener" target="_blank">#BiotechInnovation</a> <a href="https://fediscience.org/tags/DataDrivenResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#DataDrivenResearch</a>

Bgee databaseComing to <a href="https://genomic.social/tags/biocuration2025" class="mention hashtag" rel="nofollow noopener" target="_blank">#biocuration2025</a>? Join our workshop scFAIR: FAIRification of single-cell data <a href="https://www.stowers.org/events/biocuration2025" rel="nofollow noopener" translate="no" target="_blank">https://www.stowers.org/events/biocuration2025</a> <a href="https://mstdn.science/@SIB" class="u-url mention" rel="nofollow noopener" target="_blank">@SIB</a> <a href="https://genomic.social/@biocurator" class="u-url mention" rel="nofollow noopener" target="_blank">@biocurator</a> <a href="https://ecoevo.social/@marcrr" class="u-url mention" rel="nofollow noopener" target="_blank">@marcrr</a> <a href="https://ecoevo.social/@fbastian" class="u-url mention" rel="nofollow noopener" target="_blank">@fbastian</a> <a href="https://genomic.social/tags/scRNAseq" class="mention hashtag" rel="nofollow noopener" target="_blank">#scRNAseq</a> <a href="https://genomic.social/tags/FAIR" class="mention hashtag" rel="nofollow noopener" target="_blank">#FAIR</a> <a href="https://genomic.social/tags/biocuration" class="mention hashtag" rel="nofollow noopener" target="_blank">#biocuration</a> <a href="https://genomic.social/tags/bgee" class="mention hashtag" rel="nofollow noopener" target="_blank">#bgee</a> <a href="https://genomic.social/tags/FAIRdata" class="mention hashtag" rel="nofollow noopener" target="_blank">#FAIRdata</a> <a href="https://genomic.social/tags/FAIRification" class="mention hashtag" rel="nofollow noopener" target="_blank">#FAIRification</a> <a href="https://genomic.social/tags/scFAIR" class="mention hashtag" rel="nofollow noopener" target="_blank">#scFAIR</a> <a href="https://genomic.social/tags/SingleCellAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#SingleCellAnalysis</a> <a href="https://sc-fair.org/" rel="nofollow noopener" translate="no" target="_blank">https://sc-fair.org/</a>

Bgee databaseDo you know gget by the Pachter lab? You should! It now includes efficient querying of Bgee in Python. Get high quality curated gene expression data directly in Python or command line. <a href="https://pachterlab.github.io/gget/en/bgee.html" rel="nofollow noopener" translate="no" target="_blank">https://pachterlab.github.io/gget/en/bgee.html</a> <a href="https://genomic.social/tags/RNAseq" class="mention hashtag" rel="nofollow noopener" target="_blank">#RNAseq</a> <a href="https://genomic.social/tags/biocuration" class="mention hashtag" rel="nofollow noopener" target="_blank">#biocuration</a> <a href="https://genomic.social/tags/Python" class="mention hashtag" rel="nofollow noopener" target="_blank">#Python</a> <a href="https://genomic.social/tags/scRNAseq" class="mention hashtag" rel="nofollow noopener" target="_blank">#scRNAseq</a> <a href="https://mstdn.science/@SIB" class="u-url mention" rel="nofollow noopener" target="_blank">@SIB</a> <a href="https://ecoevo.social/@marcrr" class="u-url mention" rel="nofollow noopener" target="_blank">@marcrr</a> <a href="https://ecoevo.social/@fbastian" class="u-url mention" rel="nofollow noopener" target="_blank">@fbastian</a> <a href="https://ecoevo.social/@dee_unil" class="u-url mention" rel="nofollow noopener" target="_blank">@dee_unil</a><a href="https://genomic.social/tags/bgee" class="mention hashtag" rel="nofollow noopener" target="_blank">#bgee</a> <a href="https://genomic.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener" target="_blank">#Bioinformatics</a> <a href="https://genomic.social/tags/RNASequencing" class="mention hashtag" rel="nofollow noopener" target="_blank">#RNASequencing</a> <a href="https://genomic.social/tags/SingleCellRNASeq" class="mention hashtag" rel="nofollow noopener" target="_blank">#SingleCellRNASeq</a> <a href="https://genomic.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#Genomics</a> <a href="https://genomic.social/tags/Transcriptomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#Transcriptomics</a> <a href="https://genomic.social/tags/GeneExpression" class="mention hashtag" rel="nofollow noopener" target="_blank">#GeneExpression</a> <a href="https://genomic.social/tags/ComputationalBiology" class="mention hashtag" rel="nofollow noopener" target="_blank">#ComputationalBiology</a> <a href="https://genomic.social/tags/SingleCellAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#SingleCellAnalysis</a> <a href="https://genomic.social/tags/GeneExpressionAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#GeneExpressionAnalysis</a>

Lukas VFN 🇪🇺New research on <a href="https://scholar.social/tags/microbes" class="mention hashtag" rel="nofollow noopener" target="_blank">#microbes</a> expands the known limits for life on Earth and beyond <a href="https://phys.org/news/2024-01-microbes-limits-life-earth.html" rel="nofollow noopener" translate="no" target="_blank">https://phys.org/news/2024-01-microbes-limits-life-earth.html</a><a href="https://scholar.social/tags/SingleCellAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#SingleCellAnalysis</a> in <a href="https://scholar.social/tags/hypersaline" class="mention hashtag" rel="nofollow noopener" target="_blank">#hypersaline</a> brines predicts a water-activity limit of <a href="https://scholar.social/tags/microbial" class="mention hashtag" rel="nofollow noopener" target="_blank">#microbial</a> anabolic activity <a href="https://www.science.org/doi/10.1126/sciadv.adj3594" rel="nofollow noopener" translate="no" target="_blank">https://www.science.org/doi/10.1126/sciadv.adj3594</a>"the research shows how increasing <a href="https://scholar.social/tags/salinity" class="mention hashtag" rel="nofollow noopener" target="_blank">#salinity</a> changes microbial community composition, rates of <a href="https://scholar.social/tags/metabolism" class="mention hashtag" rel="nofollow noopener" target="_blank">#metabolism</a>. These can impact nutrient cycling, as well as the lives of <a href="https://scholar.social/tags/crustaceans" class="mention hashtag" rel="nofollow noopener" target="_blank">#crustaceans</a> & <a href="https://scholar.social/tags/insects" class="mention hashtag" rel="nofollow noopener" target="_blank">#insects</a>, which are essential food sources for migratory <a href="https://scholar.social/tags/birds" class="mention hashtag" rel="nofollow noopener" target="_blank">#birds</a>, other <a href="https://scholar.social/tags/animals" class="mention hashtag" rel="nofollow noopener" target="_blank">#animals</a>"

Tim DobbsAnybody know about anything cool happening in <a href="https://genomic.social/tags/FlowCytometry" class="mention hashtag" rel="nofollow noopener" target="_blank">#FlowCytometry</a> lately? I want to hear some neat stuff about <a href="https://genomic.social/tags/SingleCellAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#SingleCellAnalysis</a>

kupac^ESC:wqHey <a href="https://functional.cafe/tags/rstats" class="mention hashtag" rel="nofollow noopener" target="_blank">#rstats</a> folks, do you think it's OK to use arithmetic mean to characterise (zero inflated) count data? Apparently it's the de facto standard in <a href="https://functional.cafe/tags/SingleCellAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#SingleCellAnalysis</a> <a href="https://functional.cafe/tags/transcriptomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#transcriptomics</a>, but I'm not the only one who thinks it's dodgy <a href="https://github.com/satijalab/seurat/issues/5542" rel="nofollow noopener" target="_blank">https://github.com/satijalab/seurat/issues/5542</a> <a href="https://functional.cafe/tags/Seurat" class="mention hashtag" rel="nofollow noopener" target="_blank">#Seurat</a>

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