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katch wreck<p>"These data show that a reversible depletion of <a href="https://mastodon.social/tags/Polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Polycomb</span></a> proteins can induce cancer in the absence of driver mutations, suggesting that tumours can emerge through <a href="https://mastodon.social/tags/epigenetic" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>epigenetic</span></a> dysregulation leading to inheritance of altered cell fates"</p><p><a href="https://www.nature.com/articles/s41586-024-07328-w" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">nature.com/articles/s41586-024</span><span class="invisible">-07328-w</span></a></p><p><a href="https://mastodon.social/tags/cancer" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>cancer</span></a> <a href="https://mastodon.social/tags/oncology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>oncology</span></a></p>
The EMBO Journal<p>Seung Kim, Frederick Dick et al show that resting <a href="https://sciencemastodon.com/tags/Bcells" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bcells</span></a> are uniquely sensitive to <a href="https://sciencemastodon.com/tags/EZH2" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>EZH2</span></a> <a href="https://sciencemastodon.com/tags/polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>polycomb</span></a> complex inhibition, which activates expression of repetitive genomic elements and subsequent <a href="https://sciencemastodon.com/tags/innateimmune" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>innateimmune</span></a> receptor signaling in a form of viral mimicry</p><p><a href="https://www.embopress.org/doi/full/10.15252/embj.2023114462" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">embopress.org/doi/full/10.1525</span><span class="invisible">2/embj.2023114462</span></a></p>
CavalliLab<p>A famous <a href="https://mastodon.social/tags/Polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Polycomb</span></a> protein with roles in gene silencing but also activation!</p><p>BMI1 fine-tunes gene repression and activation to safeguard undifferentiated spermatogonia fate</p><p>Front. Cell Dev. Biol., Volume 11 - 2023 </p><p><a href="https://doi.org/10.3389/fcell.2023.1146849" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.3389/fcell.2023.114</span><span class="invisible">6849</span></a></p>
CavalliLab<p>PROTAC degraders Rock! Read this application to the <a href="https://mastodon.social/tags/Polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Polycomb</span></a> BMI and RING1B proteins:<br>Targeted Degradation of PRC1 Components, BMI1 and RING1B, via a Novel Protein Complex Degrader Strategy.<br><a href="https://doi.org/10.1002/advs.202205573" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="">doi.org/10.1002/advs.202205573</span><span class="invisible"></span></a></p>
CavalliLab<p>New discoveries about <a href="https://mastodon.social/tags/Polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Polycomb</span></a> <a href="https://mastodon.social/tags/EZH2" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>EZH2</span></a> function in <a href="https://mastodon.social/tags/MultipleMyeloma" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MultipleMyeloma</span></a> and a therapeutic avenue here:<br>Dissecting and targeting noncanonical functions of EZH2 in multiple myeloma via an EZH2 degrader. Oncogene (2023). <a href="https://doi.org/10.1038/s41388-023-02618-5" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.1038/s41388-023-026</span><span class="invisible">18-5</span></a></p>
The EMBO Journal<p><a href="https://sciencemastodon.com/tags/BRD4" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BRD4</span></a>-<a href="https://sciencemastodon.com/tags/PRC2" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PRC2</span></a> represses <a href="https://sciencemastodon.com/tags/transcription" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>transcription</span></a> of T-helper 2-specific negative regulators during <a href="https://sciencemastodon.com/tags/Tcell" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Tcell</span></a> <a href="https://sciencemastodon.com/tags/differentiation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>differentiation</span></a>:<br>Brd4 interacts with <a href="https://sciencemastodon.com/tags/Polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Polycomb</span></a> repressive complex 2 (PRC2) to repress transcriptional expression of T-helper 2 (Th2)-negative regulators <a href="https://sciencemastodon.com/tags/Foxp3" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Foxp3</span></a> and E3 <a href="https://sciencemastodon.com/tags/ubiqutin" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ubiqutin</span></a> <a href="https://sciencemastodon.com/tags/ligase" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ligase</span></a> <a href="https://sciencemastodon.com/tags/Fbxw7" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Fbxw7</span></a> during lineage-specific differentiation of <a href="https://sciencemastodon.com/tags/Th2" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Th2</span></a> cells from mouse primary naïve CD4+ T cells<br><a href="https://www.embopress.org/doi/10.15252/embj.2022111473" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">embopress.org/doi/10.15252/emb</span><span class="invisible">j.2022111473</span></a></p>
Gene Regulation<p>1st weekly digest of <a href="https://genomic.social/tags/GeneRegulation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>GeneRegulation</span></a> papers:</p><p>🧬<a href="https://genomic.social/tags/TranscriptionFactor" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TranscriptionFactor</span></a> atlas of differentiation <a href="https://www.sciencedirect.com/science/article/pii/S0092867422014702" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">sciencedirect.com/science/arti</span><span class="invisible">cle/pii/S0092867422014702</span></a></p><p>🧬 <a href="https://genomic.social/tags/TFbinding" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TFbinding</span></a> directed heterochromatin (<a href="https://genomic.social/tags/ZFP462" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ZFP462</span></a>) <a href="https://www.nature.com/articles/s41556-022-01051-2" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">nature.com/articles/s41556-022</span><span class="invisible">-01051-2</span></a></p><p>🧬<a href="https://genomic.social/tags/3Dgenome" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>3Dgenome</span></a> organisation of nuclear speckles &amp; splicing <a href="https://www.biorxiv.org/content/10.1101/2023.01.04.522632v1" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">23.01.04.522632v1</span></a></p><p>🧬 Nuclear partitioning by charge blocks (<a href="https://genomic.social/tags/MED1" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>MED1</span></a>, <a href="https://genomic.social/tags/PolII" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PolII</span></a>) <a href="https://www.sciencedirect.com/science/article/pii/S0092867422015264" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">sciencedirect.com/science/arti</span><span class="invisible">cle/pii/S0092867422015264</span></a></p><p>🧬 Transient loss of <a href="https://genomic.social/tags/Polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Polycomb</span></a> induces an <a href="https://genomic.social/tags/epigenetic" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>epigenetic</span></a> cancer fate <a href="https://www.biorxiv.org/content/10.1101/2023.01.04.522799v1" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">23.01.04.522799v1</span></a></p><p>🧬 RGT: a toolbox for NGS analysis <a href="https://www.biorxiv.org/content/10.1101/2022.12.31.522372v1" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">22.12.31.522372v1</span></a></p>
CavalliLab<p><a href="https://mastodon.social/tags/Epigenetic" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Epigenetic</span></a> Alert: we posted a bioRxiv manuscript of exceptional interest (we think) !<br>Transient loss of <a href="https://mastodon.social/tags/Polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Polycomb</span></a> components induces an <a href="https://mastodon.social/tags/epigenetic" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>epigenetic</span></a> <a href="https://mastodon.social/tags/cancer" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>cancer</span></a> fate <a href="http://dlvr.it/SgPSrc" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">http://</span><span class="">dlvr.it/SgPSrc</span><span class="invisible"></span></a><br>Brief thread follows, we are looking for feedback, thank you in advance!</p>
PLOS Biology<p>A decline in ERK1/2 signaling promotes <a href="https://fediscience.org/tags/neural" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>neural</span></a> <a href="https://fediscience.org/tags/differentiation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>differentiation</span></a> by regulating <a href="https://fediscience.org/tags/chromatin" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>chromatin</span></a> accessibility &amp; <a href="https://fediscience.org/tags/polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>polycomb</span></a> protein occupancy at neural genes in mouse embryo &amp; in human neural precursors @katestorey27 @metzisv @briscoejames &amp;co <a href="https://fediscience.org/tags/PLOSBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PLOSBiology</span></a> <a href="https://plos.io/3OYGPF4" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="">plos.io/3OYGPF4</span><span class="invisible"></span></a></p>
PLOS Biology<p>A decline in ERK1/2 signaling promotes <a href="https://fediscience.org/tags/neural" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>neural</span></a> <a href="https://fediscience.org/tags/differentiation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>differentiation</span></a> by regulating <a href="https://fediscience.org/tags/chromatin" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>chromatin</span></a> accessibility &amp; <a href="https://fediscience.org/tags/polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>polycomb</span></a> protein occupancy at neural genes in mouse embryo &amp; in human neural precursors @katestorey27 @metzisv @briscoejames &amp;co <a href="https://fediscience.org/tags/PLOSBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PLOSBiology</span></a> <a href="https://plos.io/3OYGPF4" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="">plos.io/3OYGPF4</span><span class="invisible"></span></a></p>
PLOS Biology<p>A decline in ERK1/2 signaling promotes <a href="https://fediscience.org/tags/neural" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>neural</span></a> <a href="https://fediscience.org/tags/differentiation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>differentiation</span></a> by regulating <a href="https://fediscience.org/tags/chromatin" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>chromatin</span></a> accessibility &amp; <a href="https://fediscience.org/tags/polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>polycomb</span></a> protein occupancy at neural genes in mouse embryo &amp; in human neural precursors @katestorey27 @metzisv @briscoejames &amp;co <a href="https://fediscience.org/tags/PLOSBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PLOSBiology</span></a> <a href="https://plos.io/3OYGPF4" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="">plos.io/3OYGPF4</span><span class="invisible"></span></a></p>
Mill_lab<p><span class="h-card"><a href="https://genomic.social/@EliasFriman" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>EliasFriman</span></a></span> Congratulations Elias &amp; team Bickmore past and present! Amazing stuff on <a href="https://mstdn.social/tags/promoters" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>promoters</span></a>, <a href="https://mstdn.social/tags/enhancers" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>enhancers</span></a> &amp; ulltra-longe range interactions w/o <a href="https://mstdn.social/tags/cohensin" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>cohensin</span></a> and <a href="https://mstdn.social/tags/polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>polycomb</span></a> across <a href="https://mstdn.social/tags/mESCs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>mESCs</span></a>, mammalian and other cell types- excellent tweetorial- you should covert to a tootorial here!</p>
Olga Stepanova<p>Hi <a href="https://genomic.social/tags/ScienceMastodon" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ScienceMastodon</span></a> 🔬 !</p><p>✨ <a href="https://genomic.social/tags/introduction" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>introduction</span></a> ✨ </p><p>I'm a final year <a href="https://genomic.social/tags/PhD" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PhD</span></a> student from Richard Meehan's lab at MRC HGU, University of Edinburgh 🏴󠁧󠁢󠁳󠁣󠁴󠁿 .</p><p>In my project I'm investigating what roles <a href="https://genomic.social/tags/DNAmethylation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>DNAmethylation</span></a> and <a href="https://genomic.social/tags/polycomb" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>polycomb</span></a> play in <a href="https://genomic.social/tags/pluripotency" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>pluripotency</span></a> and differentiation of mouse embryonic <a href="https://genomic.social/tags/stemcells" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>stemcells</span></a> 🐭 🧬 </p><p>I'm a wet-lab biologist by training but I've been learning lots of <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>bioinformatics</span></a> recently and I'm hoping to do a <a href="https://genomic.social/tags/postdoc" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>postdoc</span></a> in Europe where I can combine both skillsets 🇪🇺</p>