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#Bioconductor

2 posts2 participants1 post today
Public
Lluís Revilla

Some #R #rstats about the packages on the repositories: #CRAN has 722 packages that use Bioconductor (3%), #Bioconductor has 2802 packages that use CRAN's packages (77%).

1.3% CRAN and 0.6% Bioconductor respectively use package outside these two repositories. But 91% and 93% use packages on their respective repos. 8% and 3% do not have any dependency on external packages (but could depend on system dependencies).

Public
Bioconductor

🎉 Announcing the EuroBioC2025 Sticker Design Winner! 🎉

🏆 Winner: Chaima Hkimi

🎨 Chaima’s design draws on some of Barcelona’s most iconic landmarks, featuring the Sagrada Família and the vibrant colours of Park Güell. She even swapped the 'i' in 'BioC' for the Bioconductor logo — a creative nod to the project!

Thanks to everyone who submitted a design. You’ll be able to pick up Chaima’s sticker at EuroBioC2025!

EuroBioC2025 hex sticker design featuring the Sagrada Família in the centre, vibrant mosaic patterns inspired by Park Güell at the bottom, and other Barcelona landmarks like the crane and towers. The Bioconductor logo replaces the "i" in "BioC", and "bioconductor.org" is written across the top left. The overall shape is a yellow-bordered hexagon.
#EuroBioC2025#Bioconductor#Bioinformatics
Public
galaxyproject

🎓 GBCC2025 Training Topics 🌟

GBCC2025 is coming soon! We want to hear from you:

- Topics you're interested in learning about
- Interest in leading a session

Fill out the form by March 21st to help shape our training schedule!

🔗 forms.gle/i34Ag8SHMtBAmpPh7

Thanks! 🙏

For more information about the Galaxy Bioconductor Community Conference (June 23 - 26, 2025), see the GBCC2025 website: gbcc2025.org

Google DocsExpression of interest for GBCC2025 training topicsGBCC2025 is coming up soon and we'd like to hear from you! This year, we're doing things a little differently with our joint conference between Galaxy and Bioconductor. There will be 10 training sessions, each lasting 1.5 hours. Please fill out this form to: Indicate the topics you are interested in learning about at GBCC this year. Express your interest in leading a training session (optional). Note: This year, there are no abstract submissions for package demos or workshops, only talks and posters. If you want to lead a training session, please use this form. If you're interested in giving a talk or presenting a poster, please submit through the conference abstract submission page. Fill out this form by Friday, March 21st, so that we can create a training schedule that better serves all of us in the Galaxy and Bioconductor community. Thank you for your input! The GBCC2025 Organizing Committee
#GBCC2025#Bioconductor#DataScience
Public
Bioconductor

🎓 GBCC2025 Training Topics 🌟

GBCC2025 is coming soon! We want to hear from you:

- Topics you're interested in learning about
- Interest in leading a session

Fill out the form by March 21st to help shape our training schedule!

🔗 buff.ly/vCQw8pR

Thanks! 🙏

Google DocsExpression of interest for GBCC2025 training topicsGBCC2025 is coming up soon and we'd like to hear from you! This year, we're doing things a little differently with our joint conference between Galaxy and Bioconductor. There will be 10 training sessions, each lasting 1.5 hours. Please fill out this form to: Indicate the topics you are interested in learning about at GBCC this year. Express your interest in leading a training session (optional). Note: This year, there are no abstract submissions for package demos or workshops, only talks and posters. If you want to lead a training session, please use this form. If you're interested in giving a talk or presenting a poster, please submit through the conference abstract submission page. Fill out this form by Friday, March 21st, so that we can create a training schedule that better serves all of us in the Galaxy and Bioconductor community. Thank you for your input! The GBCC2025 Organizing Committee
#GBCC2025#Bioconductor#UseGalaxy
Public
Bioconductor

📅 The tidyomics group's next meeting is on Wednesday, March 12th at 4 PM NY / 9 PM London / 8 AM (Thursday) Melbourne. They'll discuss enhancing the SummarizedExperiment display and seek feedback on the tidyprint package. Check Bioconductor Slack #tidiness-in-bioc channel or Bioconductor events page calendar for more info: buff.ly/rdhL3jL

buff.lyBioconductor - EventsThe Bioconductor project aims to develop and share open source software for precise and repeatable analysis of biological data. We foster an inclusive and collaborative community of developers and data scientists.
#Bioconductor#Tidyomics#Bioinformatics
Public
Bioconductor

📝 New Bioconductor blog post on mentoring in Outreachy!

Svetlana Ugarcina Perovic shares her experiences with the Microbiome Study Curation project and open science. Check it out here: buff.ly/43aPLAc
Interested in mentoring? Submit a project by March 7, 2025, 4 PM UTC at #Outreachy: buff.ly/3wzLxne

Thanks Svetlana!

Bioconductor community blogOpen Science Mentoring: My Journey with Outreachy Mentees – Bioconductor community blogA blog for the Bioconductor community!
#Bioconductor#Bioinformatics#Microbiome
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